Year

Name

Status

Title

Type

Roles of Supervision

2007

Muhammad Faiz Misman

Graduated

Biomarker Gen Identification from Gene Expression Microarray Data Using A Hybrid Approach For Cancer Identification

Research

Main Supervisor

Naveena A/P S. Gopal Nair

Graduated

Genes Selection for Classification of Acute Lymphoblastic Leukemia Cancers from Microarray Gene Expression Data Using ReliefF Algorithm

Research

Main Supervisor

Norhana Saad

Graduated

Application of Information Gain and Neural Network Classifier in Microarray Analysis For Classification of Myeloid or Lymphoid Leukemia

Research

Main Supervisor

2011

Lim Fong Tee

Graduated

Validation of Hierarchical Gene Clusters Using Repeated Measurements

Research

Main Supervisor

Mardhiah Binti Alias

Graduated

Utilization of Interpro Domain Signatures for Broadening Pathways Knowledge

Research

Main Supervisor

Abdul Hakim Bin Mohamed Salleh

Graduated

Identifying Metabolic Pathway within Microarray Gene Expression Data Using Combination of Probabilistic Models

Research

Main Supervisor

Tan Ai Kung

Graduated

Using Bayesian Networks to Construct Gene Regulatory Networks from Microarray Data

Research

Main Supervisor

Kohbalan A/L Moorthy

Graduated

Random Forest for Gene Selection and Microarray Data Classification

Research

Main Supervisor

Chan Weng Howe

Graduated

Prediction of Protein Residue Contact Using Support Vector Machine

Research

Main Supervisor

Chai Suk Phin

Graduated

Constructing Gene Regulatory Network from Yeast Dataset Using Time Delay Linear Regression Models

Research

Main Supervisor

Nordayana Binti A. Rahim

Graduated

 

Bayesian Markov Random Fields Analysis for Protein Function Prediction Based on Protein-Protein Interaction Data

Research

Co- Supervisor

Nor Diyana Binti Roslan

Graduated

L1 Penalized Estimation in the Cox Proportional Hazards Model for Survival Analysis

Research

Co- Supervisor

Raja Nurul Mardhiah Binti Raja Mohamad

Graduated

Change Point Detection of Genomic Sequences Using Weighted Least Squares for Instance Quality of the Measurements

Research

Co-Supervisor

Anis Farihan Binti Mat Raffei

Graduated

Protein Relative Estimation from Leukemia Data Using Variable Slope Normalization for Reverse Phase Protein Arrays

Research

Co- Supervisor

Chin Hui Shi

Graduated

A Pathway-Based Approach for Analyzing Microarray Data Using Random Forests

Research

Co- Supervisor

2012

Ng Siew Teng

Graduated

Using Particle Optimization for Estimating Kinetics Parameters on Essential Amino Acids of Arabidopsis Thaliana

Research

Main Supervisor

Leong Yi Ying

Graduated

Simulation of Yeast Fermentation Pathway Using Bees Algorithm

Research

Main Supervisor

Yeoh Jia Xing

Graduated

Parameter Estimation Using Improved Differential Evolution and Bacterial Foraging Algorithm to Model the Tyrosine Production

Research

Main Supervisor

Nor Farhah Binti Saidin

Graduated

Using Ant Colony Optimization on Kinetic Modeling of Aceton Production in Lactococcus Lactis C7

Research

Main Supervisor

Norhaini Binti Baba

Graduated

Continous Dynamic Bayesian Network for Gene Regulatory Network Modeling

Research

Main Supervisor

Law Chow Kuan

Graduated

Investigating the Effects of Imputation Methods for Modeling Gene Networks Using Dynamic Bayesian Network from Gene Expression Data

Research

Main Supervisor

Masarrah Binti Abdul Mutalib

Graduated

Inferring Gene Network from Gene Expression Data Using Dynamic Bayesian Network with Different Scoring Metric Approaches

Research

Main Supervisor

Ana Haziqah Binti A. Rashid

Graduated

Producing Succinic Acid in Yeast Using Differential Evolution Approach

Research

Main Supervisor

 

Lee Seet Sun

Graduated

Artificial Bee Colony for Producing High Yields of Succinate and Lactate in Escherichia Coli

Research

Main Supervisor

Yin Leang Huat

Graduated

Prediction of Vanillin Production in Yeast Using Hybrid of Bees Algorithm and Flux Balance Analysis Method

Research

Main Supervisor

2013

 

 

Wong Sou Kah

Graduated

Biological Analysis of Microarray Data through Functional Profiling Using Orthogonal Forward Selection Combine Clustering Approach

Research

Main Supervisor

Ting Wai Soon

Graduated

Gene Selection Based on Iterative Feature Elimination Random Survival Forest

Research

Main Supervisor

Chong Shiue Kee

Graduated

Ant Colony Optimization Method for Optimization of Succinic Acid Production in Escherichia Coli

Research

Main Supervisor

Tang Phooi Wah

Graduated

A Hybrid of Artificial Bee Colony and Minimization of Metabolic Adjustment for Microbial Strain Optimization

Research

Main Supervisor

Tan Ching Siang

Graduated

An Improved MSVM-Re for Gene Selection and Weighted Gene Co-Expression Network Analysis (WGCNA) for Correlation Network Analysis

Research

Main Supervisor

Chua Pooi San

Graduated

An Enhancement of Succinate and Lactate Production in Escherichia Coli with Bat Algorithm

Research

Main Supervisor

Lu Shi Jing

Graduated

A Hybrid of Ant Colony Optimization Algorithm and Flux Balance Analysis to Improved Vanillin Production in Yeast

Research

Main Supervisor

Koo Ching Lee

Graduated

Bees Algorithm for Optimizing Lactate and Succinate Production in Escherichia Coli

Research

Main Supervisor

Tham Wen Shi

Graduated

Functional Analysis of Microarray Gene Expression Data Using Random Forest and Gene Ontology

Research

Main Supervisor

Chew Shieh Hui

Graduated

Missing Value Estimation for Gene Expression Data Using Bayesian Principal Component Analysis

Research

Main Supervisor

 

Low Swee Thing

Graduated

Inferring Gene Regulatory Networks Using Dynamic Bayesian Network with Markov Chain Monte Carlo Algorithm

Research

Co- supervisor

 

Liew Mei Jing

Graduated

Optimizing Ethanol Production in Escherichia Coli Using Particle Swarm Optimization

Research

Co- Supervisor

2014

Nies Hui Wen

Graduated

Improving Cluster Detection of Functional Microarray Data Using Principal Components Analysis and Clustering Approach

Research

Main Supervisor

Lem Sze Yee

Graduated

Functional Analysis of Microarray Gene Expression Data Using Gene Selection Method with Gene Ontology

Research

Main Supervisor

Ng Shee Ting

Graduated

Hybridization of Cuckoo Search and Flux Balance Analysis for Optimization of Vanillin Production in Yeast

Research

Main Supervisor

Sior Pei Shun

Graduated

Hybrid Differential Evolution and Adaptive Bacterial Foraging Optimization in Parameter Estimation of Tyrosine Production

Research

Main Supervisor

Teoh Tze Jia

Graduated

Using a Hybrid Algorithm on Parameter Estimation of Aceton Production in Lactococcus Lactis C7

Research

Main Supervisor

Cindy Loi Suok Sieng

Graduated

Inferring Gene Regulatory Networks Using Dynamic Bayesian Network with Estimation of Distribution Algorithm

Research

Main Supervisor

Ooi Soon Yeow

Graduated

Bacterial Foraging Optimization Method for Optimization of Succinic Acid Production in Escherichia Coli

Research

Main Supervisor

Schee Xin Lin

Graduated

A Hybrid Imperialist Competitive Algorithm for Optimizing Ethanol Production in Escherichia Coli

Research

Main Supervisor

Tan Li Chin

Graduated

A Teaching-Learning Based Optimization Algorithm in Parameter Estimation of Yeast Fermentation Pathway

Research

Main Supervisor

Nor Syahirah Binti Abdul Wahi

Graduated

Hybridization of Harmony Search and Minimization of Metabolic Adjustment for Optimization of Succinic Acid Production

Research

Main Supervisor

Muhammad Mahfuz Bin Zainuddin

Graduated

Inferring Gene Network Using Dynamic Bayesian Network with Bayesian Optimization Algorithm and Scoring Metric Approaches

Research

Co- Supervisor

Aw Mei Yee

Graduated

Parameter Estimation on Aspartate Metabolism of Arabidopsis Thaliana Using Hybrid Bees Algorithm and Harmony Search

Research

Co- Supervisor

Hon Mei Kie

Graduated

An Improved Hybrid Artificial Bee Colony Algorithm for Enhancing Succinate and Lactate in Escherichia Coli

Research

Co- Supervisor

Lim Sin Yi

Graduated

Investigate the Effects of Imputation Methods for Modeling Gene Regulatory Networks

Research

Co- Supervisor

Goh Shu Teng

Graduated

Enhancement of Lactate and Succinate Production in Escherichia Coli Using a Hybrid Firefly Algorithm

Research

Co- Supervisor

2015

Mohamad Faiz Dzulkalnine

Graduated

Optimizing Ethanol Production by using Hybrid Particle Swarm Optimization and Artificial Bee Collony

Research

Main Supervisor

Mohd Izzat Yong

Graduated

A Hybrid of Bees Algorithm and Regulatory On/Off Minimization for Optimizing Lactate and Succinate Production

Research

Main Supervisor

Lee Mee Khee

Graduated

Enhancement of ethanol production in e.coli using a hybrid particle swarm optimization

Research

Main Supervisor

Leong Wan Ting

Graduated

Enhancing Ethanol Production Using a hybrid of firefly algorithm & dynamic flux balance analysis

Research

Main Supervisor

Man Mei Yen

Graduated

A hybrid of Bat Algorithm and Minimization of Metabolic Adjustment for succinate & lactate production

Research

Main Supervisor

Ahmad Muhaimin Ismail

Graduated

Parameter Estimation Using Artificial Bee Colony Algorithm for Yeast Fermentation Pathway

Research

Main Supervisor

Ong Mei Sin

Graduated

Hybrid of Firefly Algorithm & Minimization of Metabolic Adjustment to Improve Vanillin Production in Yeast

Research

Main Supervisor

Mohamad Saufie Bin Rosle

Graduated

A hybrid Particle swarm optimization & Harmony Search to estimate kinetic parameter in Arabidopsis Thaliana

Research

Main Supervisor

Tan Jun Bin

Graduated

A Hybrid of Ant Colony Optimization and Genetic Algorithm for Optimization of Succinic Acid Production

Research

Main Supervisor

2016

Arhaime Hamezze Bin Abdul Halim

Graduated

Pathway based Analysis using SVM-Elasticnet for Gene Selection and Classification

Research

Main Supervisor

Hor Zhang Neng

Graduated

A Hybrid of Differential Evolution and Minimization of Metabolic Adjustment for Succinic and Ethanol Production

Research

Main Supervisor

Luah Kim Hooi

Graduated

A Hybrid of Bees Hill and Minimization of Metabolic Adjustment for Ethanol and Succinate Production

Research

Main Supervisor

Mohammad Fahmi Arieef Bin Khairil Anuar

Graduated

A Hybrid of Integer Differential Bees and Flux Balance Analysis for Succinate and Ethanol Production

Research

Main Supervisor

Siow Shen Yee

Graduated

An Enhancement of Lactate and Succinate Production Using A Hybrid of Bacterial Optimization Algorithm

Research

Main Supervisor

Sri Nursyafika Binti Ahmad Damanhuri

Graduated

Gene Subset Selection For Cancer Classification by using An Improved Proportional Overlapping Score Method

Research

Main Supervisor

Rafidah Binti Muhamad

Graduated

Gene Identification using Pathway based Analysis and A Bias-Corrected Hierarchical Bayesian Method

Research

Main Supervisor

Noor Alyanis Farhaida Binti Mohd Zainon

Graduated

An Improved Teigen using Multiple Support Vector Machine for High Classification Accuracy

Research

Main Supervisor

Nurazreen Afiqah Binti Abd Rahman

Graduated

Pathway based Analysis using SVM-RFE for Gene Selection and Classification

Research

Main Supervisor

Nurul Nadzirah Binti Mohd Hasri

Graduated

Improved Support Vector Machine using Multiple SVM-RFE for Cancer Classification

Research

Co-Supervisor

Nur Shaidatul Akhma Binti Abdul Razak

Graduated

A Cancer Classification by using Multinomial Sparse Group Lasso Algorithm to Lower the Classification Error Rates

Research

Co-Supervisor

Nurul Athirah Binti Nasarudin

Graduated

Pathway based Analysis using SVM-LASSO for Gene Selection and Classification

Research

Co-Supervisor

Nurul Syifa Binti Kamarol Zaman

Graduated

Hybridization of Simulated Kalman Filter and Minimization of Metabolic Adjustment for Succinate and Lactate Production

Research

Co-Supervisor

Rohani Binti Mohammad Kusairi

Graduated

An Improved Parallel mRMRe for Cancer Classification

Research

 

Co-Supervisor

2017

Nurshahira binti Yusuf

Graduated

A Hybrid of Gravitational Search Algorithm and Flux Balance Analysis For Optimization Of Metabolite Production

Research

 

Main Supervisor

Nur Izzati binti Juraimi

Graduated

A Hybrid Of Bees Algorithm And Dynamic Flux Balance Analysis For Optimization of Lactate Production.

Research

 

Main Supervisor

Nurul Fatin Asyira Zulkifli

Graduated

Flower Pollination Algorithm For Kinetic Parameter Estimation In Threonine Pathway

Research

 

Co-Supervisor

Aminah Binti Mustaffa

Graduated

Performance Comparison of Nature-Inspired Optimization Algorithms For Parameter Estimation In Kinetic Model of Metabolic Systems

Research

 

Co-Supervisor

Tengku Shamimi Dahlia Binti Tengku Shaiful Anuar

Graduated

A Hybrid Of Ant Colony Optimization and Dynamic Flux Balance Analysis For Vitamin B12 Optimization

Research

 

Co-Supervisor

Tuan Watie Binti Tuan Mat

Graduated

A Hybrid of Harmony Search Algorithm and Flux Balance Analysis for Tyrosine Production

Research

 

Co-Supervisor

Siti Zaharah binti Zakaria

Graduated

Inferring pathway activity using a modified directed random walk on global gene-metabolites pathway graph

Research

 

Co-Supervisor

Nur Izzati binti Abd Rahim

Graduated

An Improved Reweighted Recursive Features Elimination Approach for Identifying Informative Cancer Genes in Multiclass Classification

Research

 

Co-Supervisor

 

 

 

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Email : mohd.saberi@gmail.com

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